hAT-N53_DR (DF0002308)

Putative non-autonomous hAT DNA transposon from zebrafish

Description

This is a young composite nonautonomous transposon; copies are ~97 identical to the consensus. It contains insertions of other transposons, such as TDR18, DNA8-1_DR, etc. The TIR is 53 bp long. Classification based on terminal similarities to hAT-37_HM and other Activator-class hAT transposons.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Ac

Hit Statistics

The model is 5819 positions long. The average length of non-redundant hits to the model is 431.9. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 6234 134771 5394 105383

External Database Links

  • Repbase : hAT-N53_DR [Requires Repbase registration]