Gypsy54-I_DR (DF0002291)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [2883-3386] - Reverse transcriptase. Positions [5146-5376] - Integrase core. LTRs are 97% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 6215 positions long. The average length of non-redundant hits to the model is 4425.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 5 1464 5 832

External Database Links