Non-autonomous DNA transposon from zebrafish
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
This is a element member from Kolobok superfamily. The terminal ~10-bp is similar to that of Kolobok-1_DR. Removed the TTAA TSDs from consensus. Reverse-complemented to match LooperN3, LooperN4, and Kolobok-1_DR. Pos 397-503 (end) are 75% identical to the end of Kolobok-1_DR.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 503 positions long. The average length of non-redundant hits to the model is 321.8. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : LOOPERN4B_DR [Requires Repbase registration]