Gypsy100-I_DR (DF0002274)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [3095-3598] - Reverse transcriptase. Positions [5045-5518] - Integrase core. 'ATGT' target site duplication. LTRs are 100% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 6684 positions long. The average length of non-redundant hits to the model is 3688.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 13 2871 12 1728

External Database Links