Gypsy161-I_DR (DF0002264)

LTR retrotransposon from zebrafish: internal sequence

Description

Positions [2930-3352] - Reverse transcriptase. Positions [1826-2302] - Integrase core. 'GTAT' target site duplication. LTRs are 97% similar to each other.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 4215 positions long. The average length of non-redundant hits to the model is 3161.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 90 3517 81 1952

External Database Links