HAT1N_DR (DF0002260)

Non-autonomous hAT DNA transposon from zebrafish


~1000 copies of HAT1N_DR are expected to populate the zebrafish genome. HATN1_DR copies are ~90% identical with the consensus sequence. This element is characterized by imperfect 9-bp terminal inverted repeats and the 8-bp target site duplications. The HAT1N_DR family is a nonautonomous derivate of some autonomous element similar to HAT1_DR. The HAT1_DR consensus sequence and HAT1_DR share the ~85% identical ~240-bp and ~140-bp 5' and 3' termini, respectively.


Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT

Hit Statistics

The model is 965 positions long. The average length of non-redundant hits to the model is 669.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Danio rerio 638 17926 608 12255

External Database Links

  • Repbase : HAT1N_DR [Requires Repbase registration]