RMER2 (DF0002179)

Putative LTR of an endogenous retrovirus (a consensus).

Description

There is currently no description for this model. Contribute annotation?

References

  1. Identification of new medium reiteration frequency repeats in the genomes of Primates, Rodentia and Lagomorpha.
    Jurka J, Kapitonov VV, Klonowski P, Walichiewicz J, Smit AF;
    Genetica ;98:235-47 Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 567 positions long. The average length of non-redundant hits to the model is 353.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 2407 4362 2125 2821

External Database Links

  • Repbase : RMER2 [Requires Repbase registration]