IAPLTR3 (DF0001789)

Mouse long terminal repeat


Individual LTRs are ~99% identical to the consensus, indicating that this family is very young. Internal sequences listed as IAPLTR3_I.


  1. The UCSC Genome Browser Database.
    Karolchik D, Baertsch R, Diekhans M, Furey TS, Hinrichs A, Lu YT, Roskin KM, Schwartz M, Sugnet CW, Thomas DJ, Weber RJ, Haussler D, Kent WJ, ;
    Nucleic Acids Res 2003;31:51-54. Pubmed


Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVK Article

Hit Statistics

The model is 326 positions long. The average length of non-redundant hits to the model is 256.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 191 14324 138 11206

External Database Links

  • Repbase : IAPLTR3 [Requires Repbase registration]