IAPEY3_LTR (DF0001779)

Mouse long terminal repeat


LTR of the IAPEY3 subfamily, internal sequences are listed as IAPEY3_I. The family is new and individual copies share 95-98% identity with the consensus. 6 bp TSDs.


  1. The UCSC Genome Browser Database.
    Karolchik D, Baertsch R, Diekhans M, Furey TS, Hinrichs A, Lu YT, Roskin KM, Schwartz M, Sugnet CW, Thomas DJ, Weber RJ, Haussler D, Kent WJ, ;
    Nucleic Acids Res 2003;31:51-54. Pubmed


Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERVK Article

Hit Statistics

The model is 332 positions long. The average length of non-redundant hits to the model is 299.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 572 22557 545 17190

External Database Links

  • Repbase : IAPEY3_LTR [Requires Repbase registration]