Transib-N1_DM is a nonautonomous family of Transib transposons.
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
Transib-N1_DM is a family of nonautonomous DNA transposons. Transib-N1_DM elements are characterized by 5-bp target site duplications and 36-bp terminal inverted repeats.
RAG1 core and V(D)J recombination signal sequences were derived from Transib transposons.
Kapitonov VV, Jurka J;
PLoS Biol 2005;3:e181-e181. Pubmed
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 514 positions long. The average length of non-redundant hits to the model is 194.2. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : Transib-N1_DM [Requires Repbase registration]