Transib5 (DF0001723)
Transib5 is a family of Transib DNA transposons
Description
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Transib5 is a family of Transib DNA transposons. It is characterized by 13-bp terminal inverted repeats and 5-bp target site duplications. Encodes the 595-aa Transib5p transposase (pos. 780-2654).
Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | DNA Transposon | Article |
| Class | Cut and Paste | |
| Superfamily | CMC-Transib |
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 3001 positions long. The average length of non-redundant hits to the model is 743.2. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Drosophila melanogaster | 49 | 77 | 49 | 77 |
External Database Links
- Repbase : Transib5 [Requires Repbase registration]