TRANSIB3 is a DNA transposon, a consensus sequence.
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
TRANSIB3 belongs to the TRANSIB family of DNA transposons. It generated duplications of the CANTG target sites upon its integration into the genome, and has 40-bp terminal inverted repeats. TRANSIB3 encodes the 688-aa TRANSIB3p transposase at positions 543-2610.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 2883 positions long. The average length of non-redundant hits to the model is 521.6. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : TRANSIB3 [Requires Repbase registration]