TRANSIB2 (DF0001720)

TRANSIB2 is a DNA transposon, a consensus sequence.

Description

TRANSIB2 belongs to the TRANSIB family of DNA transposons. It generated 5-bp duplications of the CANTG target sites upon its integration into the genome, has 43-bp terminal inverted repeats. TRANSIB2p is likely the most accurate reconstruction of a TRANSIB-like transposase, due to the youth of the family. TRANSIB2 encodes the 690-aa TRANSIB2p transposase (positions 543-2612).

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily CMC-Transib

Hit Statistics

The model is 2844 positions long. The average length of non-redundant hits to the model is 645.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Drosophila melanogaster 112 336 102 227

External Database Links

  • Repbase : TRANSIB2 [Requires Repbase registration]