TC1-2_DM (DF0001713)

TC1-2_DM is a DNA transposon, a consensus sequence.

Description

TC1-2_DM belongs to the Mariner/Tc1 superfamily of DNA transposons. It has generated duplications of TA target sites upon its integration into the genome. TC1-2_DM has 26-bp imperfect terminal inverted repeats and it encodes a 340-aa transposase (TC1-2_DMp, positions 356-1375).

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily TcMar-Tc1

Hit Statistics

The model is 1644 positions long. The average length of non-redundant hits to the model is 628.6. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Drosophila melanogaster 82 199 76 160

External Database Links

  • Repbase : TC1-2_DM [Requires Repbase registration]