Nonautonomous form of PROTOP DNA transposon.
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Nonautonomous DNA transposon derived from autonomous P-like transposon PROTOP (proto-P). PROTOP_A has perfect 30 bp-long TIRs and it generates 7 bp-long duplications of target sites upon its integration in the genome.
[Hoppel-family of mobile elements of Drosophila melanogaster, flanked by short inverted repeats and having preferential localization in the heterochromatin regions of the genome].
Kurenova EV, LeÄbovich BA, Bass IA, Bebikhov DV, Pavlova MN, Danilevskaia ON;
Genetika 1990;26:1701-1712. Pubmed
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 1105 positions long. The average length of non-redundant hits to the model is 554.1. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : PROTOP_A [Requires Repbase registration]