Invader4_LTR (DF0001656)
INVADER4_LTR is a long terminal repeat from the INVADER4 retrovirus
Description
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
INVADER4_LTR is a long terminal repeat from INVADER4 endogenous retrovirus; it flanks INVADER4_I internal sequence. INVADER4_LTR copies are 99% identical to the consensus sequence.
Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | Retrotransposon | Article |
| Class | LTR | Article |
| Superfamily | Gypsy | Article |
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 346 positions long. The average length of non-redundant hits to the model is 309.7. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Drosophila melanogaster | 49 | 97 | 46 | 94 |
External Database Links
- Repbase : INVADER4_LTR [Requires Repbase registration]