Invader4_I (DF0001655)

INVADER4_I is an internal portion of INVADER4 retrovirus-like element

Description

INVADER4 has populated the D.melanogaster genome recently since its proviral copies are almost identical and flanked by identical or 1% divergent LTRs. It was transposed in a nonautonomous mode. It encodes only the gag-like DNA binding protein protein. INVADER4 generates 4 bp target site duplications upon its integration into the drosophila genome. INVADER4 belongs to the INVADER group of GYPSY-like retroviruses, together with MICROPIA, BLASTOPIA, MDG3, INVADER1, INVADER2 and INVADER3.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 2413 positions long. The average length of non-redundant hits to the model is 598.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Drosophila melanogaster 86 623 63 363

External Database Links

  • Repbase : INVADER4_I [Requires Repbase registration]