INVADER3_I is an internal portion of INVADER3 retrovirus-like element
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
INVADER3 may be an active retroelement since some of its proviral copies are almost identical and flanked by identical LTRs. INVADER3 generates 4 bp target site duplications upon its integration into the drosophila genome. INVADER3_I encodes 1573-aa polyprotein which includes gag, protease (peptidase A2), integrase and RT domains. INVADER3 belongs to the INVADER group of GYPSY-like transposons together with MICROPIA, BLASTOPIA, MDG3, INVADER1 and INVADER2.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 4888 positions long. The average length of non-redundant hits to the model is 1478.4. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : INVADER3_I [Requires Repbase registration]