Invader2_I (DF0001651)

INVADER2_I is an internal portion of INVADER1 retrovirus-like element

Description

INVADER2 may be an active retroelement since some of its proviral copies are almost identical and flanked by 99% identical LTRs. INVADER2 generates 4 bp target site duplications upon its integration into the drosophila genome. INVADER2_I encodes a 1474-aa polyprotein which is composed of gag, protease (peptidase A2), integrase and RT domains. INVADER2 belongs to the INVADER group of GYPSY-like transposons together with MICROPIA, BLASTOPIA, MDG3, INVADER1 and INVADER3.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 4592 positions long. The average length of non-redundant hits to the model is 1323.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Drosophila melanogaster 149 1451 135 899

External Database Links

  • Repbase : INVADER2_I [Requires Repbase registration]