G5A_DM (DF0001603)

G5A_DM is a non-LTR retrotransposon

Description

G5A_DM belongs to the JOCKEY clade of non-LTR retrotransposons. The ORF2 encodes the 904-aa G5A_DM-orf2p endonuclease and reverse transcriptase (positions 16-2727).

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily Jockey

Hit Statistics

The model is 2800 positions long. The average length of non-redundant hits to the model is 525.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Drosophila melanogaster 94 1485 78 935

External Database Links

  • Repbase : G5A_DM [Requires Repbase registration]