G3_DM is a non_LTR retrotransposon
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
G3_DM belongs to the JOCKEY group of non-LTR retrotransposons. It has poly(A) tail and it generates 10-15 bp-long direct repeats upon its integration into the genome. ORF1 encodes a DNA binding protein; ORF2 encodes endonuclease and reverse transcriptase domains.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 4605 positions long. The average length of non-redundant hits to the model is 494.1. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : G3_DM [Requires Repbase registration]