G3_DM (DF0001601)

G3_DM is a non_LTR retrotransposon

Description

G3_DM belongs to the JOCKEY group of non-LTR retrotransposons. It has poly(A) tail and it generates 10-15 bp-long direct repeats upon its integration into the genome. ORF1 encodes a DNA binding protein; ORF2 encodes endonuclease and reverse transcriptase domains.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily Jockey

Hit Statistics

The model is 4605 positions long. The average length of non-redundant hits to the model is 494.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Drosophila melanogaster 59 1871 55 1470

External Database Links

  • Repbase : G3_DM [Requires Repbase registration]