DMRT1B (DF0001582)

DMRT1B is a non-LTR retrotransposon, a consensus sequence.

Description

DMRT1B belongs to the R1 clade of non-LTR retrotransposons. It has two ORFs. ORF1 encodes a putative nucleic acid binding protein. ORF2 encodes reverse transcriptase.

References

  1. Identification of Waldo-A and Waldo-B, two closely related non-LTR retrotransposons in Drosophila.
    Busseau I, Berezikov E, Bucheton A;
    Mol Biol Evol 2001;18:196-205. Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily R1

Hit Statistics

The model is 5183 positions long. The average length of non-redundant hits to the model is 1150.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Drosophila melanogaster 327 840 318 756

External Database Links

  • Repbase : DMRT1B [Requires Repbase registration]