Chimpo_I (DF0001554)

Internal portion of Chimpo retrovirus-like element.

Description

Conceptual translation suggests that ORF1 and ORF2 overlap 52 nucleotides. There is a one-nucleotide frameshift (+1) between both ORF.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 4059 positions long. The average length of non-redundant hits to the model is 1303. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Drosophila melanogaster 62 441 60 311

External Database Links

  • Repbase : Chimpo_I [Requires Repbase registration]