BLOOD_I is an internal portion of the BLOOD LTR retrotransposon
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LTR of BLOOD retrotransposon is BLOOD_LTR. BLOOD insertions have 4 bp long target site duplications (all targets are different). Some of the copies are identical, including LTRs. BLOOD is presumably an active LTR-retrotransposon. site duplications (all targets are different). Some of the copies are identical, including LTRs. BLOOD is presumably an active LTR-retrotransposon. BLOOD is related to MDG1, DM412 and TABOR retrotransposons found in Drosophila.
Retrotransposon insertion induces an isozyme of sn-glycerol-3-phosphate dehydrogenase in Drosophila melanogaster.
Wilanowski TM, Gibson JB, Symonds JE;
Proc Natl Acad Sci U S A 1995;92:12065-12069. Pubmed
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 6613 positions long. The average length of non-redundant hits to the model is 3501.4. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : BLOOD_I [Requires Repbase registration]