Baggins1 (DF0001536)

BAGGINS1 is a non_LTR retrotransposon


BAGGINS1 belongs to the LOA clade of non-LTR retrotransposons. It has two ORFs. ORF1 encodes a protein of unknown function similar to a protein encoded by LOA. ORF2 encodes the reverse transcriptase and RNaseH domains. ORF2 includes the Ribonuclease H domain.


Accession Name Wikipedia
Type Retrotransposon Article
Class LINE
Superfamily LOA

Hit Statistics

The model is 5453 positions long. The average length of non-redundant hits to the model is 807.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Drosophila melanogaster 327 432 322 417

External Database Links

  • Repbase : BAGGINS1 [Requires Repbase registration]