LTR from the ACCORD2 endogenous retrovirus
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
ACCORD2_LTR is a long terminal repeat from ACCORD endogenous retrovirus; it flanks ACCORD2_I internal sequence. ACCORD2_LTR copies are ~98% identical to the consensus sequence.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 215 positions long. The average length of non-redundant hits to the model is 189. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : ACCORD2_LTR [Requires Repbase registration]