ACCORD2_I (DF0001530)

ACCORD2_I is an internal portion of ACCORD2 endogenous retrovirus.

Description

LTR of ACCORD2 is ACCORD2_LTR. ACCORD2 was active relatively recently since its internal portion is flanked by 98% identical LTRs. Regions encoding Gag, RT and INT proteins are slightly damaged by mutations.

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily Gypsy Article

Hit Statistics

The model is 7212 positions long. The average length of non-redundant hits to the model is 595.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Drosophila melanogaster 224 2303 188 1889

External Database Links

  • Repbase : ACCORD2_I [Requires Repbase registration]