ACCORD2_I is an internal portion of ACCORD2 endogenous retrovirus.
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
LTR of ACCORD2 is ACCORD2_LTR. ACCORD2 was active relatively recently since its internal portion is flanked by 98% identical LTRs. Regions encoding Gag, RT and INT proteins are slightly damaged by mutations.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 7212 positions long. The average length of non-redundant hits to the model is 595.8. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : ACCORD2_I [Requires Repbase registration]