5S_DM (DF0001529)
Drosophila melanogaster 5S DNA sequence.
Description
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
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References
-
Transcriptionally active and inactive gene repeats within the D. melanogaster 5S RNA gene cluster.
Sharp S, Garcia A, Cooley L, Söll D;
Nucleic Acids Res 1984;12:7617-7632. Pubmed
Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | ncNRA Gene | |
| Class | Undefined | |
| Superfamily | Undefined |
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 135 positions long. The average length of non-redundant hits to the model is 135.2. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Drosophila melanogaster | 100 | 100 | 100 | 100 |
External Database Links
- Repbase : 5S_DM [Requires Repbase registration]