A family of Vingi non-LTR retrotransposons
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Recent expansion of a new Ingi-related clade of Vingi non-LTR retrotransposons in hedgehogs.
Kojima KK, Kapitonov VV, Jurka J;
Mol Biol Evol 2011;28:17-20. Pubmed
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 2860 positions long. The average length of non-redundant hits to the model is 507.8. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : Vingi-1_CE [Requires Repbase registration]