SINE1_CE is a putative SINE-like retroposon
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SINE1_CE is a putative SINE-like retroelement. It's possible that this repeat is a 3'-tail of CR1(LINE2)-like non-LTR retrotransposon since it does not generate duplications of target sites upon its integration in the genome and has AATAAA(TTA)n 3'-tail.
Note: Uncertain classification.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 261 positions long. The average length of non-redundant hits to the model is 169.4. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : SINE1_CE [Requires Repbase registration]