TC5B nonautonomous DNA transposon
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TC5B is a nonautonomous DNA transposon derived from TC5. TC5B elements are flanked by 3 bp-long target-site duplications (TNA) and 140 bp-long terminal inverted repeats.
Identification of putative nonautonomous transposable elements associated with several transposon families in Caenorhabditis elegans.
Oosumi T, Garlick B, Belknap WR;
J Mol Evol 1996;43:11-18. Pubmed
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 641 positions long. The average length of non-redundant hits to the model is 267.2. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : TC5B [Requires Repbase registration]