PALTA2_CE (DF0001461)

PALTA2_CE is a putative nonautonomous DNA transposon

Description

PALTA2_CE is a putative non-autonomous DNA transposon; it has almost perfect 690 bp-long terminal inverted repeat and generates duplication of TA target site upon its integration in the genome. Multiple transpositions of PALTA2_CE were likely induced by Mariner/Tc-like transposase.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily TcMar-Tc1?

Note: Uncertain classification.

Hit Statistics

The model is 1534 positions long. The average length of non-redundant hits to the model is 228.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Caenorhabditis elegans 154 2705 64 342

External Database Links

  • Repbase : PALTA2_CE [Requires Repbase registration]