PALTA1_CE (DF0001460)

PALTA1_CE is a putative nonautonomous DNA transposon

Description

PALTA1_CE is a putative non-autonomous DNA transposon; it has almost perfect 600 bp-long terminal inverted repeat and generates duplication of TA target site upon its integration in the genome. Multiple transpositions of PALTA1_CE were likely induced by Mariner/Tc-like transposase.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily TcMar-Tc1?

Note: Uncertain classification.

Hit Statistics

The model is 1466 positions long. The average length of non-redundant hits to the model is 471.9. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Caenorhabditis elegans 117 692 114 548

External Database Links

  • Repbase : PALTA1_CE [Requires Repbase registration]