PAL9A_CE is a putative nonautonomous DNA transposon
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PAL9A_CE is a putative non-autonomous DNA transposon; it forms almost perfect palindrome and generates duplications of 9 bp-long target sites upon its integration in the genome. Multiple transpositions of PAL9A_CE were likely induced by MUDR-like transposase. PAL9A_CE is a composite transposon since it carries another nonautonomous transposon NPALTA1_CE (position ~888-1058).
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 1947 positions long. The average length of non-redundant hits to the model is 800. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : PAL9A_CE [Requires Repbase registration]