PAL9A_CE (DF0001458)

PAL9A_CE is a putative nonautonomous DNA transposon

Description

PAL9A_CE is a putative non-autonomous DNA transposon; it forms almost perfect palindrome and generates duplications of 9 bp-long target sites upon its integration in the genome. Multiple transpositions of PAL9A_CE were likely induced by MUDR-like transposase. PAL9A_CE is a composite transposon since it carries another nonautonomous transposon NPALTA1_CE (position ~888-1058).

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily MULE-MuDR

Hit Statistics

The model is 1947 positions long. The average length of non-redundant hits to the model is 800. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Caenorhabditis elegans 38 498 38 498

External Database Links

  • Repbase : PAL9A_CE [Requires Repbase registration]