PAL8C_1 (DF0001453)

PAL8C_1 is a nonautonomous DNA transposon

Description

PAL8C_1 is a putative non-autonomous DNA transposon. It generates 8-bp duplications of target sites upon integration in the genome. PAL8C_1 has perfect 26-bp terminal inverted repeats. The length of the target site duplications hints that transposase involved in proliferation of PAL8C_1 belongs to the HAT superfamily.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT

Hit Statistics

The model is 212 positions long. The average length of non-redundant hits to the model is 165.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Caenorhabditis elegans 325 957 216 622

External Database Links

  • Repbase : PAL8C_1 [Requires Repbase registration]