PAL5A_CE (DF0001450)

PAL5A_CE non-autonomous DNA transposon

Description

PAL5A_CE is a putative non-autonomous DNA transposon; it forms almost perfect 396 bp-long palindrome and generates duplication of 5 bp-long target site upon its integration in the genome. PAL5A_CE can be still mobile since some of its individual copies are more than 98% identical with the consensus sequence.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily Undefined

Hit Statistics

The model is 792 positions long. The average length of non-redundant hits to the model is 592.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Caenorhabditis elegans 372 1023 323 711

External Database Links

  • Repbase : PAL5A_CE [Requires Repbase registration]