NPAL0A_CE (DF0001445)

NPAL0A_CE is a putative non-autonomous DNA transposon

Description

NPAL0A_CE is a putative non-autonomous DNA transposon. It does not generate identifiable target-site duplications, unless it has strong CTAG target-site specificity and induces a duplication of the central TA. NPAL0A_CE is flanked by 118 bp-long terminal inverted repeats and it forms non-perfect palindrome with a 50 bp-long central loop.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily Undefined

Hit Statistics

The model is 286 positions long. The average length of non-redundant hits to the model is 161.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Caenorhabditis elegans 81 152 35 73

External Database Links

  • Repbase : NPAL0A_CE [Requires Repbase registration]