NPAL0A_CE is a putative non-autonomous DNA transposon
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NPAL0A_CE is a putative non-autonomous DNA transposon. It does not generate identifiable target-site duplications, unless it has strong CTAG target-site specificity and induces a duplication of the central TA. NPAL0A_CE is flanked by 118 bp-long terminal inverted repeats and it forms non-perfect palindrome with a 50 bp-long central loop.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 286 positions long. The average length of non-redundant hits to the model is 161.3. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : NPAL0A_CE [Requires Repbase registration]