Mariner5_CE (DF0001437)

Autonomous DNA transposon from C. elegans

Description

MARINER5_CE is a prototype of one of the oldest Mariner-like DNA transposons in the C.elegans that were active 15-30 million years ago. MARINER5_CE is flanked by TA target site duplications and it has perfect 27 bp-long terminal inverted repeats.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily TcMar-Mariner

Hit Statistics

The model is 1247 positions long. The average length of non-redundant hits to the model is 432.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Caenorhabditis elegans 55 248 49 219

External Database Links

  • Repbase : MARINER5_CE [Requires Repbase registration]