Autonomous DNA transposon from C. elegans
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MARINER4_CE is a prototype of autonomous DNA transposon that was active in C.elegans genome more than 10 million years ago. MARINER4_CE is flanked by TA target site duplications and it has 31 bp-long terminal inverted repeats.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 1250 positions long. The average length of non-redundant hits to the model is 575.8. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : MARINER4_CE [Requires Repbase registration]