HelitronY1_CE (DF0001409)

HELITRONY1_CE is a nonautonomous DNA transposon

Description

Several portions of HELITRONY1_CE have been reported previously as the RCA1, RCD1, RC35 and RCC9 minisatellite like repeats [1].

References

  1. Molecular and genomic organization of clusters of repetitive DNA sequences in Caenorhabditis elegans.
    Naclerio G, Cangiano G, Coulson A, Levitt A, Ruvolo V, La Volpe A;
    J Mol Biol 1992;226:159-168. Pubmed

  2. Rolling-circle transposons in eukaryotes.
    Kapitonov VV, Jurka J;
    Proc Natl Acad Sci U S A 2001;98:8714-8719. Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Rolling Circle
Superfamily Helitron Article

Hit Statistics

The model is 2593 positions long. The average length of non-redundant hits to the model is 1063.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Caenorhabditis elegans 562 2680 462 1912

External Database Links