HAT3_CE (DF0001403)

HAT3_CE nonautonomous DNA transposon

Description

HAT3_CE is a putative non-autonomous DNA transposon. It generates 8-bp duplications of target sites upon integration in the genome. HAT3_CE has perfect 11-bp terminal inverted repeats. The length of the target site duplications indicates that transposase encoded by the autonomous HAT3_CE-like element is related to the HAT superfamily.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT

Hit Statistics

The model is 391 positions long. The average length of non-redundant hits to the model is 176.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Caenorhabditis elegans 255 1002 204 826

External Database Links

  • Repbase : HAT3_CE [Requires Repbase registration]