HAT2_CE (DF0001402)

HAT2_CE nonautonomous DNA transposon

Description

HAT2_CE is a putative non-autonomous DNA transposon. It generates duplication of 8 bp-long target site upon integration in the genome. HAT2_CE has 17 bp-long perfect terminal inverted repeats. The length of the target site duplications indicates that transposase encoded by the autonomous HAT2_CE-like element is related to the HAT superfamily.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT

Hit Statistics

The model is 564 positions long. The average length of non-redundant hits to the model is 357.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Caenorhabditis elegans 89 325 89 325

External Database Links

  • Repbase : HAT2_CE [Requires Repbase registration]