CeRep1A (DF0001384)

Nematode CeRep1.1 repeat DNA

Description

CEREP1A is a putative nonautonomous DNA transposon. This element is flanked by identical 383 bp-long terminal inverted repeats and it generates 8 bp-long duplications of a target site upon its integration in the genome. Presumably, HAT-related transposase is involved in propagation of CEREP1A

References

  1. Structure and evolution of a family of interspersed repetitive DNA sequences in Caenorhabditis elegans.
    Felsenstein KM, Emmons SW;
    J Mol Evol 1987;25:230-240. Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily MULE-MuDR

Hit Statistics

The model is 3401 positions long. The average length of non-redundant hits to the model is 462.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Caenorhabditis elegans 57 131 33 76

External Database Links

  • Repbase : CEREP1A [Requires Repbase registration]