CEMUDR2 (DF0001360)
CEMUDR2 is an autonomous DNA transposon
Description
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CEMUDR2 is an autonomous DNA transposon. CEMUDR2 encodes CEMUDR2p, a 742-aa MUDR-like transposase. CEMUDR2p and CEMUDR1p form a superfamily together with MuDR-like transposases in plants and ISRm3/IS1201-like transposases in bacteria.
Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | DNA Transposon | Article |
| Class | Cut and Paste | |
| Superfamily | MULE-MuDR |
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 5505 positions long. The average length of non-redundant hits to the model is 455.2. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Caenorhabditis elegans | 50 | 647 | 37 | 457 |
External Database Links
- Repbase : CEMUDR2 [Requires Repbase registration]