CELE45 is a putative SINE-like retroelement related to RTE1
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
Reverse complemented to match tRNA position and orientation. Pos 1-83 tRNA, 206-241 matches RTE1 3prime end (remotely)
Identification of putative nonautonomous transposable elements associated with several transposon families in Caenorhabditis elegans.
Oosumi T, Garlick B, Belknap WR;
J Mol Evol 1996;43:11-18. Pubmed
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 266 positions long. The average length of non-redundant hits to the model is 166.5. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : CELE45 [Requires Repbase registration]