hAT-N62_DR (DF0001344)
Putative nonautonomous hAT DNA transposon
Description
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
TIR is 11-bp long, TSD is 8-bp long. This sequence was derived from sequence data generated by the Danio rerio Sequencing Group at the Sanger Institute.
Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | DNA Transposon | Article |
| Class | Cut and Paste | |
| Superfamily | hAT? |
Note: Uncertain classification.
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 908 positions long. The average length of non-redundant hits to the model is 499.2. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Danio rerio | 284 | 1284 | 248 | 1019 |
External Database Links
- Repbase : hAT-N62_DR [Requires Repbase registration]