UCON97 (DF0001308)

Repetitive element conserved in all mammals.

Description

17-18 bp TIRs. TSDs unclear, though 8 bp is possible. Seen in turtles.

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily Undefined

Hit Statistics

The model is 310 positions long. The average length of non-redundant hits to the model is 190.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 23 23 20 20
Homo sapiens 51 52 34 35

External Database Links

  • Repbase : UCON97 [Requires Repbase registration]