UCON99 (DF0001294)

DNA transposon, conserved in all mammals.

Description

371 bp long hairpin, with a loop from pos 165-208. Termini may not have been reached.

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily Undefined

Hit Statistics

The model is 371 positions long. The average length of non-redundant hits to the model is 199.9. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 37 57 22 33
Homo sapiens 78 136 48 73

External Database Links

  • Repbase : UCON99 [Requires Repbase registration]