Zaphod4a (DF0001290)

hAT-Tip100 DNA transposon, Zaphod4a subfamily

Description

8 bp TSDs. Only 7 bp TIRs. Non-autonomous. Remaining ORF 1022-1567 encodes the C-terminal quarter of a transposase closest to Arthur1_Cin_tp and Arthur3_Api_tp, but closer to original Zaphod than to original Arthur. Sloppy hairpin structure at 637-736. Pos 303-338 is inverse duplicated at pos 576-541. Present at orthologous sites in elephant and humans, absent in opossum.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Tip100

Hit Statistics

The model is 1823 positions long. The average length of non-redundant hits to the model is 402.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 66 82 47 60
Homo sapiens 255 409 203 305

External Database Links

None recorded for this entry