Arthur2 (DF0001276)

Repetitive element conserved in all mammals.

Description

True termini are as yet undefined. ORF from pos 504-3239 encodes a transposases closest to that of hAT-82_HMa in Hydra in the Arthur (Dent/Riggs) sub group of Tip100/Hitchhiker elements.

Synonyms: X29a_DNA

References

  1. Distinct groups of repetitive families preserved in mammals correspond to different periods of regulatory innovations in vertebrates.
    Jurka J, Bao W, Kojima KK, Kohany O, Yurka MG;
    Biol Direct 2012;7:36-36. Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Tip100

Hit Statistics

The model is 3700 positions long. The average length of non-redundant hits to the model is 394. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 318 333 274 286
Homo sapiens 909 1121 662 785

External Database Links

  • Repbase : X29a_DNA [Requires Repbase registration]